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Table 3 Predicted targeted genes for miR-454-3p (based on MANE transcript)

From: miR-454-3p and miR-194-5p targeting cardiac sarcolemma ion exchange transcripts are potential noninvasive diagnostic biomarkers for childhood dilated cardiomyopathy in Egyptian patients

Gene

MANE transcript

Binding probability

Binding energy

AU rich region fraction

Positions

KEEG pathways

CACNB2

NM_201590

0.953846154

− 20

0.75

3′UTR

Cardiac muscle contraction (hsa04260)

NM_201596

0.953846154

− 20

0.75

3′UTR

ATP1A4

 

1

− 19.6

0.485

CDS

CACNB2

NM_201590

0.953846154

− 20

0.75

3′UTR

DCM (hsa05414)

 

NM_201596

0.953846154

− 20

0.75

3′UTR

TGFB2

NM_003238

1

− 18.3

0.529

3′UTR

ITGB6

NM_000888

1

− 19.8

0.5

CDS

 

ITGA2B

NM_000419

1

− 19.1

0.471

CDS

 

Common target gene in the used KEEG pathways

CACNB2

  1. It means matched annotated transcripts from refseq (NCBI) and gencode (Ensemble;EMBL-EBI)