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Table 4 Predicted targeted genes for has-mir-194-5p (based on MANE transcript)

From: miR-454-3p and miR-194-5p targeting cardiac sarcolemma ion exchange transcripts are potential noninvasive diagnostic biomarkers for childhood dilated cardiomyopathy in Egyptian patients

Gene MANE Transcript Binding probability Binding energy AU rich region fraction Positions KEEG pathways
CACNA2D1 NM_000722 1 − 20.5 0.588 3′UTR Cardiac muscle contraction (hsa04260)
CACNA1C NM_000719 0.991452991 − 22.1 0.456 3′UTR
  NM_001167623 0.991452991 − 22.1 0.456 3′UTR
ATP1B3 NM_001679 1 − 17.6 0.515 CDS
ATP1A1 NM_000701 1 − 21.9 0.5 CDS
RYR2 NM_001035 1 − 20.5 0.5 CDS
CACNA2D1 NM_000722 1 − 20.5 0.588 3′UTR DCM (hsa05414)
CACNA1C NM_000719 0.991452991 − 22.1 0.456 3′UTR
  NM_001167623 0.991452991 − 22.1 0.456 3′UTR
TGFB2 NM_003238 1 − 23.6 0.529 3′UTR
DAG1 NM_004393 1 − 19.3 0.441 3′UTR
TTN NM_001267550 1 − 22.8 0.515 CDS
ITGA2 NM_002203 1 − 18.3 0.691 CDS
RYR2 NM_001035 1 − 20.5 0.5 CDS
Common target genes in the used KEEG pathways
CACNA2D1, CACNA1C, RYR2
  1. It means matched annotated transcripts from refseq (NCBI) and gencode (Ensemble;EMBL-EBI)